ENCODE
Search the ENCODE Portal. ENCODE. SCREEN. Functional genomics. Functional characterization. Encyclopedia of elements. Rush Alzheimer’s. EN-TEx. Deeply profiled cell lines. Protein knockdown (Degron) Computational and integrative products. Human donors. ENCORE. Stem cell differentiation. Imputed experiments.
ENCODE Encyclopedia, Version 4: Genomic annotations – ENCODE
The ENCODE Encyclopedia organizes the most salient analysis products into annotations and provides tools to search and visualize them. The Encyclopedia has two levels of annotations: Integrative-level annotations integrate multiple types of …
Getting Started - ENCODE
Welcome to the ENCODE Portal! The ENCODE Portal, developed and maintained by the Data Coordination Center (ENCODE DCC), is the canonical source for all experimental metadata and data from ENCODE and associated projects.
ENCODE Encyclopedia
The ENCODE Project aims to map all functional elements of the human and mouse genomes. Progress toward this goal has involved over ten thousand epigenomic experiments utilizing a wide array of assays.
Project Overview – ENCODE
The goal of ENCODE is to build a comprehensive parts list of functional elements in the human genome, including elements that act at the protein and RNA levels, and regulatory elements that control cells and circumstances in which a gene is active.
FAQ - ENCODE
The goal of ENCODE is to build a comprehensive parts list of functional elements in the human genome, including elements that act at the protein and RNA levels, and regulatory elements that control cells and circumstances in which a gene is active.
SCREEN: Search Candidate Regulatory Elements by ENCODE
SCREEN is a web interface for searching and visualizing the Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE data. The Registry contains 1,063,878 human cCREs in GRCh38 and 313,838 mouse cCREs in mm10, …
publications – ENCODE
The Encyclopedia of DNA Elements (ENCODE) project has established a genomic resource for mammalian development, profiling a diverse panel of mouse tissues at 8 developmental stages from 10.5 days after conception until birth, including …
Data - ENCODE
ENCODE Home. Data. Functional Genomics data. Experiment search; Experiment matrix; ChIP-seq matrix; Human and mouse body maps; Functional genomics series; Single-cell experiments; Functional Characterization data. Experiment search; Experiment matrix; Cloud Resources; AWS Open Data; Azure Open Datasets;
Access to ENCODE data
The ENCODE portal contains these features to access, view, and download ENCODE data: Search metadata : The metadata describing the assays can be searched by entering any string into the text box in the upper right corner of the page or via the faceted browser.